diff --git a/homeassistant/bootstrap.py b/homeassistant/bootstrap.py
index 74196cdc625..8435fe73d40 100644
--- a/homeassistant/bootstrap.py
+++ b/homeassistant/bootstrap.py
@@ -256,22 +256,39 @@ async def async_setup_hass(
     runtime_config: RuntimeConfig,
 ) -> core.HomeAssistant | None:
     """Set up Home Assistant."""
-    hass = core.HomeAssistant(runtime_config.config_dir)
 
-    async_enable_logging(
-        hass,
-        runtime_config.verbose,
-        runtime_config.log_rotate_days,
-        runtime_config.log_file,
-        runtime_config.log_no_color,
-    )
+    def create_hass() -> core.HomeAssistant:
+        """Create the hass object and do basic setup."""
+        hass = core.HomeAssistant(runtime_config.config_dir)
+        loader.async_setup(hass)
 
-    if runtime_config.debug or hass.loop.get_debug():
-        hass.config.debug = True
+        async_enable_logging(
+            hass,
+            runtime_config.verbose,
+            runtime_config.log_rotate_days,
+            runtime_config.log_file,
+            runtime_config.log_no_color,
+        )
+
+        if runtime_config.debug or hass.loop.get_debug():
+            hass.config.debug = True
+
+        hass.config.safe_mode = runtime_config.safe_mode
+        hass.config.skip_pip = runtime_config.skip_pip
+        hass.config.skip_pip_packages = runtime_config.skip_pip_packages
+
+        return hass
+
+    async def stop_hass(hass: core.HomeAssistant) -> None:
+        """Stop hass."""
+        # Ask integrations to shut down. It's messy but we can't
+        # do a clean stop without knowing what is broken
+        with contextlib.suppress(TimeoutError):
+            async with hass.timeout.async_timeout(10):
+                await hass.async_stop()
+
+    hass = create_hass()
 
-    hass.config.safe_mode = runtime_config.safe_mode
-    hass.config.skip_pip = runtime_config.skip_pip
-    hass.config.skip_pip_packages = runtime_config.skip_pip_packages
     if runtime_config.skip_pip or runtime_config.skip_pip_packages:
         _LOGGER.warning(
             "Skipping pip installation of required modules. This may cause issues"
@@ -283,7 +300,6 @@ async def async_setup_hass(
 
     _LOGGER.info("Config directory: %s", runtime_config.config_dir)
 
-    loader.async_setup(hass)
     block_async_io.enable()
 
     config_dict = None
@@ -309,27 +325,28 @@ async def async_setup_hass(
 
     if config_dict is None:
         recovery_mode = True
+        await stop_hass(hass)
+        hass = create_hass()
 
     elif not basic_setup_success:
         _LOGGER.warning("Unable to set up core integrations. Activating recovery mode")
         recovery_mode = True
+        await stop_hass(hass)
+        hass = create_hass()
 
     elif any(domain not in hass.config.components for domain in CRITICAL_INTEGRATIONS):
         _LOGGER.warning(
             "Detected that %s did not load. Activating recovery mode",
             ",".join(CRITICAL_INTEGRATIONS),
         )
-        # Ask integrations to shut down. It's messy but we can't
-        # do a clean stop without knowing what is broken
-        with contextlib.suppress(TimeoutError):
-            async with hass.timeout.async_timeout(10):
-                await hass.async_stop()
 
-        recovery_mode = True
         old_config = hass.config
         old_logging = hass.data.get(DATA_LOGGING)
 
-        hass = core.HomeAssistant(old_config.config_dir)
+        recovery_mode = True
+        await stop_hass(hass)
+        hass = create_hass()
+
         if old_logging:
             hass.data[DATA_LOGGING] = old_logging
         hass.config.debug = old_config.debug